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Database Storage for APIs and Backends: A Practical Guide

Database Storage for APIs and Backends: A Practical Guide

Authored by Andrew Haire

Reviewed by Chris Coleman

Last updated: February 9, 2026

Your API just hit 10,000 users. Your cloud dashboard shows 5GB of database storage usage, but you deleted half your test data yesterday. Why didn't the number drop?

If you’ve been here, you’re not alone. In the world of backend engineering, database storage isn't just a static bucket where data lives—it’s a dynamic system. The way that system manages data under concurrent requests, evolves its schema, and handles disk I/O is the difference between a scalable API and one that crashes under its own weight.

This guide focuses on database storage from an API-builder’s perspective. We’ll look past the abstract theory to the mechanics that actually dictate your performance, reliability, and development velocity.

Database storage isn’t just about gigabytes

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What database storage is

At a surface level, database storage refers to how your application persists and organizes data. But for APIs and backends, storage decisions affect far more than capacity.

They directly influence:

  • How fast your API responds
  • How predictable performance is under load
  • How safely you can evolve your schema
  • How easily you enforce permissions and business rules

In practical terms, almost every API request involves reading from or writing to storage. The way your database manages that data impacts every request your backend handles—whether you realize it or not.

Why "delete" doesn't mean "empty space"

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Why DELETE isn't enough

The most common point of confusion for developers is the "ghost data" phenomenon. Most modern relational databases—particularly PostgreSQL—use a system called MVCC (multi-version concurrency control).

When you delete a row, the database doesn't immediately scrub that spot on the disk. Instead, it marks the row as "invisible" (a dead tuple). It stays there so that other active database transactions can still see the data if they started before your deletion.

This creates bloat. Space is only reclaimed later by a process called VACUUM, which finds those dead tuples and marks the space as "available for reuse." This is why your storage metrics often stay flat even after a massive cleanup.

💡 Pro-Tip: You can check for "bloat" in PostgreSQL by comparing the actual table size to the expected size based on row counts. If your table size is significantly larger than your data, your autovacuum settings might need tuning.

The 4 layers of database storage

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4 layers of storage

To manage an API effectively, you have to look beyond the total gigabytes. Storage is comprised of four distinct layers:

1. The heap (the data)

This is the raw storage of your records. The size of the heap is dictated by your choice of data types. Using a BigInt when a SmallInt would suffice may seem trivial, but at 10 million rows, those extra bytes translate into gigabytes of wasted overhead.

2. Indexes (the map)

Indexes make your GET requests fast, but they are not free. An index is essentially a separate table that must be stored on disk. In high-performance APIs, it is common for indexes to take up 30-50% of total storage.

3. WAL (write-ahead logging)

Before data is written to the main heap, it is recorded in a write-ahead log. This ensures that if the power goes out, the database can recover. If your API is write-heavy (e.g., logging every user click), your WAL files can cause temporary storage spikes.

4. TOAST (large objects)

PostgreSQL has a limit on page size (usually 8KB). If you try to store a massive JSON blob or a long text string in a single field, the database moves that data to a separate "oversized attribute storage technique" (TOAST) area. This can make certain tables appear smaller than they actually are.

3 storage mistakes that kill API performance

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3 storage mistakes

Mistake #1: Over-indexing

Developers often add an index to every column in a table "just in case." While this speeds up reads, it slows down every INSERT, UPDATE, and DELETE because the database must update the index files simultaneously. It also inflates your storage costs unnecessarily.

Mistake #2: Storing binary large objects (BLOBs)

Storing images, PDFs, or large files as Base64 strings directly in your database is a recipe for a heavy backend. The fix: Store the file in a dedicated object storage bucket (like S3) and store only the URL/pointer in your database.

Mistake #3: Ignoring N+1 query patterns

Storage and logic are linked. An unoptimized API that performs N+1 queries (requesting data in a loop) forces the database to scan storage repeatedly, leading to high I/O wait times even if your total storage volume is small.

Every additional query in an N+1 pattern forces the database to perform extra disk I/O, meaning even a small dataset can perform as poorly as a massive one if the logic is inefficient.

How this influences database decisions

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Choosing databases

Instead of asking “What database should I use?”, backend teams should think in terms of operational and iteration constraints.

Key questions to ask:

  • What kind of data are you storing? Highly relational data favors structured relational storage.
  • Who accesses the data? Fine-grained permissions often belong close to the data layer.
  • How often does your schema change? Frequent changes demand safe, predictable migrations.
  • How much DevOps bandwidth does your team actually have?

This table gives you a quick way to visualize the tradeoffs.

Feature

Self-Hosted (DIY)

Managed DB (RDS/Cloud SQL)

Unified Backend (e.g., Xano)

Maintenance

Manual VACUUM and tuning

Automated backups

Zero-ops maintenance

Scaling

Complex sharding

Vertical scaling (paid)

Seamless/elastic

Schema Changes

Manual migration scripts

Manual migration scripts

Auto-updating API endpoints

Still upping your database game? Check out more database best practices here.

The unified backend advantage: Moving beyond manual maintenance

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The unified backend advantage

For many teams, database administration slowly becomes a bottleneck. Tuning autovacuum settings, monitoring index bloat, writing migration scripts, and keeping API logic in sync with schema changes all add friction—especially for small or fast-moving teams.

Unified backend platforms (like Xano) take a different approach. Instead of treating the database as a separate component you have to babysit, they provide a unified environment where storage, APIs, and business logic are tightly aligned.

With Xano:

  • PostgreSQL is fully managed under the hood
  • Maintenance tasks like VACUUM are handled by the platform
  • Schema changes automatically propagate to API logic
  • Storage behavior is visible and predictable as your backend evolves
  • Storage usage is transparent, so you can easily compare temporary storage vs. true table size.

This reduces the number of moving parts and lowers the cognitive load required to maintain a healthy backend.

An all-in-one backend with integrated storage is especially valuable when:

  • You’re building API-first products
  • Your team is small or resource-constrained
  • You need to iterate quickly without breaking clients
  • You want fewer infrastructure decisions early on

This doesn’t mean you’ll never outgrow an integrated platform—but for many teams, it removes the biggest sources of backend friction when it matters most.

The bottom line

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The bottom line

Database storage isn’t just a number on a dashboard. It’s a living system that shapes your API performance, your team’s velocity, and your product’s ability to scale.

Teams that succeed don’t just monitor storage metrics—they understand the mechanics behind them. From dead tuples and index overhead to query patterns and schema design, that understanding turns storage from a source of confusion into a strategic advantage.

If you’re seeing unexplained storage growth in your own backend, start simple: Audit your indexes, review how your APIs query data, and look for the ghost data you may already be paying for.

And if you want to make database management, modeling, and all other backend tasks easier, check out Xano for free.